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From desruisse...@apache.org
Subject [sis] branch geoapi-3.1 updated (93dca74 -> 2751173)
Date Tue, 30 Apr 2019 14:25:07 GMT
This is an automated email from the ASF dual-hosted git repository.

desruisseaux pushed a change to branch geoapi-3.1
in repository https://gitbox.apache.org/repos/asf/sis.git.


    from 93dca74  Merge branch 'geoapi-4.0' into geoapi-3.1. This include mostly netCDF work,
with sis-raster improvements in support.
     add 4263e79  Edit `GridCoverageResource` contract by allowing `getGridGeometry()` and
`getSampleDimensions()` to be slightly different than the corresponding `GridCoverage` properties.
     add 6f2b61e  If a netCDF variable contains "flag_names" or "flag_meanings" attribute,
create categories for enumeration values instead than for the range of quantitative values.
     add 14efbad  First draft of "Sinusoidal equal-area" projection, also known as "Sanson-Flamsteed".
This commit put only the spherical formulas. Ellipsoidal formulas will come later. https://issues.apache.org/jira/browse/SIS-450
     add 9566eb7  Add skeleton base class for meridional distance calculation on ellipsoid.
Add formulas to be used as reference in the test class (the formula actually used by implementation
may differ). https://issues.apache.org/jira/browse/SIS-450
     add 8a492bc  Implement MeridionalDistance.meridianArc(…).
     add 8158557  Adjust the computation of "gridToCRS" in pixel center when derivating from
another grid geometry.
     add b24e5d8  Improve comments about the adjustment done for PixelInCell.CELL_CENTER when
deriving a GridGeometry from another one.
     add ea60179  Rename an "ellipse" boolean parameter as "ellipsoidal".
     add d2c0625  Fix derivative calculation and add tests.
     add 8e03db4  Implement MeridionalDistance.inverse(double).
     add 7e66753  Complete the tests for MeridionalDistance inverse method.
     add fc71753  Rename "MeridionalDistanceBased" class as "MeridianArcBased" because online
dictionaries seem to define "meridional distance" as "the distance or departure from the meridian;
the easting or westing", which is not what we mean. EPSG guidance note and Snyder do not use
"meridional distance" expression neither for the quantity computed here.
     add becfcc7  Implement ellipsoidal formulas for the sinusoidale projection. This commit
completes https://issues.apache.org/jira/browse/SIS-450
     add 0945e8a  Partial work toward parsing netCDF "grid_mapping" attributes.
     add 53ade5d  Add inference of "grid to CRS" transform from netCDF attributes associated
to "grid_mapping" variable.
     add b638306  More complete parsing of "grid_mapping" parameters specified by CF-conventions.
     add 5d0d7e7  Consolidation of parsing of "grid_mapping" attributes in netCDF file: -
Change order of some methods in Convention class for grouping "domain" or "range" aspects
together. - Take in account the "latitude_longitude" pseudo-projection special case. - Add
a Convention.defaultHorizontalCRS(boolean) method in replacement of CRSBuilder.DEFAULT constant.
- Replace some in-line strings for attribute name by constants.
     add 3dbcae8  Rename org.apache.sis.metadata.fra module as org.apache.sis.profile.france.
The reason is that national profiles may be on other aspects than metadata.
     add 9987015  A CSAuthorityFactory containing at least the coordinate system EPSG::4400
should be available even if there is no connection to the EPSG database. This is required
for some data stores like netCDF. The CSAuthorityFactory interface is added on EPSGFactoryFallback.
     add 851bd10  Apply to ConformalProjection the same Snyder 3-35 formulas (trigonometric
identities) than we did for MeridianArcBased. Include the coefficients in the serialization,
since recomputing values after deserialization may not produce the exact same results than
the values computed at construction time. Since we apply a Snyder formula now, those fields
shouls be more stable than before.
     add 3ec1609  Cleanup in test and benchmark methods.
     add 6760894  Apply to EqualAreaProjection the same Snyder 3-35 formulas (trigonometric
identities) than we did for MeridianArcBased. Include coefficients and other fields in serialization
for the same reason than ConformalProjection (simplicity, stability). During this work, we
identified a bug in the series expansion of φ(β) where the last term was multiplied by e⁸
instead of e⁶. Fixing that bug bring the series expansion to a precision where we no longer
need iterations at least wi [...]
     add 5b271a0  Include MeridianArcBased fields in serialization for the same simplicity
and numerical stability reasons than ConformalProjection and EqualAreaProjection. Inconvenient
is that the serialization is more at risk to break if the formulas implemented in those case
are improved. However MathTransform serialization should not be used for long-term storage.
It is okay for RMI purpose between JVMs running the same version of SIS.
     add 8ca9f9a  Port the "American Polyconic" projection (EPSG:9818) from Geotk as a side
effect of the work on the Sinudoisal projection (those two projections share a common basis
coded in MericianArcBased class) and cleanup some tests based on the experience gained by
the addition of those two projections.
     add 9d03001  Remove unnecessary "throws ProjectionException" in Spherical private classes.
     add 9dabf8e  Replace "spatio-temporal" by "spatiotemporal" for more uniform spelling.
     add b280070  Remove SimpleIdentifier.toWKT() because not needed anymore, and document
why PropertyInformation extends SimpleIdentifier.
     new 2751173  Merge branch 'geoapi-4.0' into geoapi-3.1. Contains work on netCDF and addition
of two map projections.

The 1 revisions listed above as "new" are entirely new to this
repository and will be described in separate emails.  The revisions
listed as "add" were already present in the repository and have only
been added to this reference.


Summary of changes:
 .../sis/internal/metadata/ReferencingServices.java |   2 +-
 .../sis/internal/simple/SimpleIdentifier.java      |  31 +-
 .../apache/sis/metadata/PropertyInformation.java   |   5 +-
 .../org/apache/sis/metadata/TreeTableView.java     |   2 +-
 .../iso/extent/DefaultSpatialTemporalExtent.java   |   4 +-
 .../sis/internal/simple/SimpleIdentifierTest.java  |  12 -
 .../org/apache/sis/internal/map/MapContext.java    |   2 +-
 .../org/apache/sis/coverage/grid/GridGeometry.java |  32 +-
 .../apache/sis/coverage/grid/PixelTranslation.java |  24 +-
 .../apache/sis/coverage/grid/GridGeometryTest.java |  33 +-
 .../internal/referencing/ReferencingUtilities.java |  18 +
 .../referencing/provider/MercatorSpherical.java    |   2 +-
 ...ertCylindricalEqualArea.java => Polyconic.java} |  59 ++--
 .../referencing/provider/PseudoPlateCarree.java    |  13 +-
 .../provider/{Mollweide.java => Sinusoidal.java}   |  48 +--
 .../org/apache/sis/parameter/ParameterFormat.java  |   2 +-
 .../java/org/apache/sis/referencing/CommonCRS.java |  46 +--
 .../sis/referencing/EPSGFactoryFallback.java       | 186 +++++++---
 .../sis/referencing/StandardDefinitions.java       |  85 +++--
 .../java/org/apache/sis/referencing/cs/Codes.java  |   3 +-
 .../referencing/factory/sql/EPSGDataAccess.java    |   2 +-
 .../operation/CoordinateOperationContext.java      |  12 +-
 .../operation/CoordinateOperationRegistry.java     |   2 +-
 .../referencing/operation/matrix/package-info.java |   4 +-
 .../operation/projection/AlbersEqualArea.java      |   4 +-
 .../operation/projection/ConformalProjection.java  | 200 ++++-------
 .../operation/projection/CylindricalEqualArea.java |   6 +-
 .../operation/projection/EqualAreaProjection.java  | 206 +++++------
 .../operation/projection/Initializer.java          |  12 +-
 .../projection/LambertConicConformal.java          |   4 +-
 .../referencing/operation/projection/Mercator.java |   4 +-
 .../operation/projection/MeridianArcBased.java     | 222 ++++++++++++
 .../operation/projection/NormalizedProjection.java |   2 +-
 .../operation/projection/ObliqueMercator.java      |   1 -
 .../operation/projection/ObliqueStereographic.java |   3 +-
 .../operation/projection/PolarStereographic.java   |   4 +-
 .../operation/projection/Polyconic.java            | 382 +++++++++++++++++++++
 .../operation/projection/Sinusoidal.java           | 240 +++++++++++++
 .../operation/projection/TransverseMercator.java   | 183 ++++++----
 .../operation/transform/MathTransforms.java        |  36 +-
 .../operation/transform/TranslationTransform.java  |   9 +
 ...g.opengis.referencing.operation.OperationMethod |   2 +
 .../org/apache/sis/geometry/TransformTestCase.java |   2 +-
 .../referencing/provider/ProvidersTest.java        |   4 +-
 .../java/org/apache/sis/referencing/CRSTest.java   |   4 +-
 .../sis/referencing/EPSGFactoryFallbackTest.java   |  38 +-
 .../sis/referencing/StandardDefinitionsTest.java   |  33 +-
 .../sis/referencing/cs/DefaultCartesianCSTest.java |   7 +-
 .../operation/CoordinateOperationFinderTest.java   |   4 +-
 .../operation/projection/AlbersEqualAreaTest.java  |  10 +-
 .../projection/ConformalProjectionTest.java        | 136 ++++----
 .../projection/EqualAreaProjectionTest.java        | 127 +++++++
 .../projection/LambertConicConformalTest.java      |   8 +-
 .../projection/MapProjectionTestCase.java          |  27 +-
 .../projection/MercatorMethodComparison.java       | 107 ++----
 .../operation/projection/MercatorTest.java         |   8 +-
 .../operation/projection/MeridianArcTest.java      | 263 ++++++++++++++
 .../sis/referencing/operation/projection/NoOp.java |   1 -
 .../projection/ObliqueStereographicTest.java       |   2 +-
 .../operation/projection/PolyconicTest.java        | 155 +++++++++
 .../operation/projection/SinusoidalTest.java       | 131 +++++++
 .../projection/TransverseMercatorTest.java         |   6 +-
 .../operation/projection/ZonedGridSystemTest.java  |   6 +-
 .../sis/test/suite/ReferencingTestSuite.java       |   4 +
 .../org/apache/sis/internal/util/Constants.java    |   6 -
 .../sis/internal/util/StandardDateFormat.java      |   2 +-
 .../java/org/apache/sis/util/ArgumentChecks.java   |   2 +-
 .../java/org/apache/sis/util/collection/Cache.java |   2 +-
 .../java/org/apache/sis/util/package-info.java     |   2 +-
 ide-project/NetBeans/nbproject/genfiles.properties |   2 +-
 ide-project/NetBeans/nbproject/project.xml         |   1 +
 profiles/sis-french-profile/pom.xml                |   2 +-
 .../apache/sis/internal/earth/netcdf/GCOM_C.java   | 266 +++++++++++---
 .../apache/sis/internal/earth/netcdf/GCOM_W.java   |  36 +-
 .../org/apache/sis/storage/gdal/TransformTest.java |   3 +-
 .../org/apache/sis/storage/geotiff/CRSBuilder.java |   2 +-
 .../org/apache/sis/internal/netcdf/CRSBuilder.java |  64 ++--
 .../org/apache/sis/internal/netcdf/Convention.java | 253 +++++++++++++-
 .../org/apache/sis/internal/netcdf/Decoder.java    |   8 +
 .../java/org/apache/sis/internal/netcdf/Grid.java  |   2 +-
 .../apache/sis/internal/netcdf/GridMapping.java    | 243 +++++++++++--
 .../apache/sis/internal/netcdf/NamedElement.java   |   2 +-
 .../java/org/apache/sis/internal/netcdf/Node.java  | 190 ++++++++++
 .../apache/sis/internal/netcdf/RasterResource.java |  41 ++-
 .../org/apache/sis/internal/netcdf/Resources.java  |   6 +
 .../sis/internal/netcdf/Resources.properties       |   1 +
 .../sis/internal/netcdf/Resources_fr.properties    |   1 +
 .../org/apache/sis/internal/netcdf/Variable.java   | 153 +--------
 .../sis/internal/netcdf/impl/ChannelDecoder.java   |  14 +-
 .../sis/internal/netcdf/impl/VariableInfo.java     |  18 +-
 .../sis/internal/netcdf/ucar/DecoderWrapper.java   |  17 +
 .../sis/internal/netcdf/ucar/GroupWrapper.java     |  78 +++++
 .../sis/internal/netcdf/ucar/VariableWrapper.java  |  26 +-
 .../sis/internal/storage/AbstractResource.java     |   4 +-
 .../sis/internal/storage/StoreUtilities.java       |   4 +-
 .../org/apache/sis/internal/storage/csv/Store.java |   6 +-
 .../sis/internal/storage/xml/package-info.java     |   2 +-
 .../main/java/org/apache/sis/storage/DataSet.java  |   4 +-
 .../apache/sis/storage/GridCoverageResource.java   |  12 +
 .../main/java/org/apache/sis/storage/Resource.java |   2 +-
 .../org/apache/sis/internal/storage/gpx/Store.java |   4 +-
 101 files changed, 3557 insertions(+), 1156 deletions(-)
 copy core/sis-referencing/src/main/java/org/apache/sis/internal/referencing/provider/{LambertCylindricalEqualArea.java
=> Polyconic.java} (60%)
 copy core/sis-referencing/src/main/java/org/apache/sis/internal/referencing/provider/{Mollweide.java
=> Sinusoidal.java} (66%)
 create mode 100644 core/sis-referencing/src/main/java/org/apache/sis/referencing/operation/projection/MeridianArcBased.java
 create mode 100644 core/sis-referencing/src/main/java/org/apache/sis/referencing/operation/projection/Polyconic.java
 create mode 100644 core/sis-referencing/src/main/java/org/apache/sis/referencing/operation/projection/Sinusoidal.java
 create mode 100644 core/sis-referencing/src/test/java/org/apache/sis/referencing/operation/projection/EqualAreaProjectionTest.java
 create mode 100644 core/sis-referencing/src/test/java/org/apache/sis/referencing/operation/projection/MeridianArcTest.java
 create mode 100644 core/sis-referencing/src/test/java/org/apache/sis/referencing/operation/projection/PolyconicTest.java
 create mode 100644 core/sis-referencing/src/test/java/org/apache/sis/referencing/operation/projection/SinusoidalTest.java
 create mode 100644 storage/sis-netcdf/src/main/java/org/apache/sis/internal/netcdf/Node.java
 create mode 100644 storage/sis-netcdf/src/main/java/org/apache/sis/internal/netcdf/ucar/GroupWrapper.java


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