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From venk sham <shamv...@gmail.com>
Subject Re: Issue in upgrading phoenix : java.lang.ArrayIndexOutOfBoundsException: SYSTEM:CATALOG 63
Date Thu, 13 Sep 2018 15:25:07 GMT
Did you check system.stats,. If it us empty, needs to be rebuilt by running
major compact on hbasr

On Tue, Sep 11, 2018, 11:33 AM Tanvi Bhandari <tanvi.bhandari@gmail.com>
wrote:

> Hi,
>
>
>
> I am trying to upgrade the phoenix binaries in my setup from phoenix-4.6
> (had optional concept of schema) to phoenix-4.14 (schema is a must in
> here).
>
> Earlier, I had the phoenix-4.6-hbase-1.1 binaries. When I try to run the
> phoenix-4.14-hbase-1.3 on the same data. Hbase comes up fine But when I try
> to connect to phoenix using sqline client,  I get the following error on
> *console*:
>
>
>
> 18/09/07 04:22:48 WARN ipc.CoprocessorRpcChannel: Call failed on
> IOException
>
> org.apache.hadoop.hbase.DoNotRetryIOException:
> org.apache.hadoop.hbase.DoNotRetryIOException: SYSTEM:CATALOG: 63
>
>         at
> org.apache.phoenix.util.ServerUtil.createIOException(ServerUtil.java:120)
>
>         at
> org.apache.phoenix.coprocessor.MetaDataEndpointImpl.getVersion(MetaDataEndpointImpl.java:3572)
>
>         at
> org.apache.phoenix.coprocessor.generated.MetaDataProtos$MetaDataService.callMethod(MetaDataProtos.java:16422)
>
>         at
> org.apache.hadoop.hbase.regionserver.HRegion.execService(HRegion.java:7435)
>
>         at
> org.apache.hadoop.hbase.regionserver.RSRpcServices.execServiceOnRegion(RSRpcServices.java:1875)
>
>         at
> org.apache.hadoop.hbase.regionserver.RSRpcServices.execService(RSRpcServices.java:1857)
>
>         at
> org.apache.hadoop.hbase.protobuf.generated.ClientProtos$ClientService$2.callBlockingMethod(ClientProtos.java:32209)
>
>         at org.apache.hadoop.hbase.ipc.RpcServer.call(RpcServer.java:2114)
>
>         at org.apache.hadoop.hbase.ipc.CallRunner.run(CallRunner.java:101)
>
>         at
> org.apache.hadoop.hbase.ipc.RpcExecutor.consumerLoop(RpcExecutor.java:130)
>
>         at
> org.apache.hadoop.hbase.ipc.RpcExecutor$1.run(RpcExecutor.java:107)
>
>         at java.lang.Thread.run(Thread.java:745)
>
> Caused by: java.lang.ArrayIndexOutOfBoundsException: 63
>
>         at org.apache.phoenix.schema.PTableImpl.init(PTableImpl.java:517)
>
>         at org.apache.phoenix.schema.PTableImpl.<init>(PTableImpl.java:421)
>
>         at
> org.apache.phoenix.schema.PTableImpl.makePTable(PTableImpl.java:406)
>
>         at
> org.apache.phoenix.coprocessor.MetaDataEndpointImpl.getTable(MetaDataEndpointImpl.java:1046)
>
>         at
> org.apache.phoenix.coprocessor.MetaDataEndpointImpl.buildTable(MetaDataEndpointImpl.java:587)
>
>        at
> org.apache.phoenix.coprocessor.MetaDataEndpointImpl.loadTable(MetaDataEndpointImpl.java:1305)
>
>         at
> org.apache.phoenix.coprocessor.MetaDataEndpointImpl.getVersion(MetaDataEndpointImpl.java:3568)
>
>         ... 10 more
>
>
>
>         at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native
> Method)
>
>         at
> sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
>
>         at
> sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
>
>         at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
>
>         at
> org.apache.hadoop.ipc.RemoteException.instantiateException(RemoteException.java:106)
>
>         at
> org.apache.hadoop.ipc.RemoteException.unwrapRemoteException(RemoteException.java:95)
>
>         at
> org.apache.hadoop.hbase.protobuf.ProtobufUtil.getRemoteException(ProtobufUtil.java:326)
>
>         at
> org.apache.hadoop.hbase.protobuf.ProtobufUtil.execService(ProtobufUtil.java:1629)
>
>         at
> org.apache.hadoop.hbase.ipc.RegionCoprocessorRpcChannel$1.call(RegionCoprocessorRpcChannel.java:104)
>
>         at
> org.apache.hadoop.hbase.ipc.RegionCoprocessorRpcChannel$1.call(RegionCoprocessorRpcChannel.java:94)
>
>         at
> org.apache.hadoop.hbase.client.RpcRetryingCaller.callWithRetries(RpcRetryingCaller.java:136)
>
>         at
> org.apache.hadoop.hbase.ipc.RegionCoprocessorRpcChannel.callExecService(RegionCoprocessorRpcChannel.java:107)
>
>         at
> org.apache.hadoop.hbase.ipc.CoprocessorRpcChannel.callMethod(CoprocessorRpcChannel.java:56)
>
>         at
> org.apache.phoenix.coprocessor.generated.MetaDataProtos$MetaDataService$Stub.getVersion(MetaDataProtos.java:16739)
>
>         at
> org.apache.phoenix.query.ConnectionQueryServicesImpl$5.call(ConnectionQueryServicesImpl.java:1271)
>
>         at
> org.apache.phoenix.query.ConnectionQueryServicesImpl$5.call(ConnectionQueryServicesImpl.java:1263)
>
>         at org.apache.hadoop.hbase.client.HTable$15.call(HTable.java:1736)
>
>         at java.util.concurrent.FutureTask.run(FutureTask.java:266)
>
>         at
> java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1142)
>
>         at
> java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:617)
>
>         at java.lang.Thread.run(Thread.java:745)
>
>
>
>
>
> *Region-server logs are as follows: *
>
> 2018-09-07 03:23:36,170 ERROR
> [B.defaultRpcServer.handler=1,queue=1,port=29062]
> coprocessor.MetaDataEndpointImpl: loading system catalog table inside
> getVersion failed
>
> java.lang.ArrayIndexOutOfBoundsException: 63
>
>                at
> org.apache.phoenix.schema.PTableImpl.init(PTableImpl.java:517)
>
>                at
> org.apache.phoenix.schema.PTableImpl.<init>(PTableImpl.java:421)
>
>                at
> org.apache.phoenix.schema.PTableImpl.makePTable(PTableImpl.java:406)
>
>                at
> org.apache.phoenix.coprocessor.MetaDataEndpointImpl.getTable(MetaDataEndpointImpl.java:1046)
>
>                at
> org.apache.phoenix.coprocessor.MetaDataEndpointImpl.buildTable(MetaDataEndpointImpl.java:587)
>
>                at
> org.apache.phoenix.coprocessor.MetaDataEndpointImpl.loadTable(MetaDataEndpointImpl.java:1305)
>
>                at
> org.apache.phoenix.coprocessor.MetaDataEndpointImpl.getVersion(MetaDataEndpointImpl.java:3568)
>
>                at
> org.apache.phoenix.coprocessor.generated.MetaDataProtos$MetaDataService.callMethod(MetaDataProtos.java:16422)
>
>                at
> org.apache.hadoop.hbase.regionserver.HRegion.execService(HRegion.java:7435)
>
>                at
> org.apache.hadoop.hbase.regionserver.RSRpcServices.execServiceOnRegion(RSRpcServices.java:1875)
>
>                at
> org.apache.hadoop.hbase.regionserver.RSRpcServices.execService(RSRpcServices.java:1857)
>
>                at
> org.apache.hadoop.hbase.protobuf.generated.ClientProtos$ClientService$2.callBlockingMethod(ClientProtos.java:32209)
>
>                at
> org.apache.hadoop.hbase.ipc.RpcServer.call(RpcServer.java:2114)
>
>                at
> org.apache.hadoop.hbase.ipc.CallRunner.run(CallRunner.java:101)
>
>                at
> org.apache.hadoop.hbase.ipc.RpcExecutor.consumerLoop(RpcExecutor.java:130)
>
>                at
> org.apache.hadoop.hbase.ipc.RpcExecutor$1.run(RpcExecutor.java:107)
>
>                at java.lang.Thread.run(Thread.java:745)
>
>
>
> suspecting that this could be something wrong with SYSTEM table, I went
> ahead and dropped all SYSTEM tables from hbase shell and again tried
> connecting to phoenix sqlline client. This time connecting through
> phoenix-sqlline worked for me. But none of my tables were visible in
> Phoenix shell only SYSTEM tables were visible.  So I went ahead and mapped
> hbase tables to phoenix and created them explicitly from phoenix sqlline
> client. I first created schema corresponding to namespace and then tables.
> This way my tables were visible in phoenix sqlline. *Select Count(*)*
> query on my table was returning 8 (expected) records as well but when *select
> ** query is not returning any record. Can someone tell me what can I do
> next in this case?
>
>
>
> Thanks,
>
> Tanvi
>
>
>

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